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GALNS galactosamine (N-acetyl)-6-sulfatase [ Columba livia (rock pigeon) ]

Gene ID: 102096794, updated on 3-Aug-2024

Summary

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Gene symbol
GALNS
Gene description
galactosamine (N-acetyl)-6-sulfatase
Locus tag
A306_01700
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See GALNS in Genome Data Viewer
Location:
chromosome: 13
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 13 NC_088614.1 (6418259..6464470)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973333.1 (6132358..6178208)

Chromosome 13 - NC_088614.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135575340 Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene PABPN1 like, cytoplasmic Neighboring gene trafficking protein particle complex subunit 2L Neighboring gene adenine phosphoribosyltransferase Neighboring gene chromatin licensing and DNA replication factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables arylsulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosamine-6-sulfatase
Names
galactosamine (N-acetyl)-6-sulfate sulfatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088614.1 Reference bColLiv1.pat.W.v2

    Range
    6418259..6464470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005504723.3 → XP_005504780.2  N-acetylgalactosamine-6-sulfatase

Nucleotide Protein
Heading Accession and Version

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