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COG5 component of oligomeric golgi complex 5 [ Columba livia (rock pigeon) ]

Gene ID: 102095121, updated on 3-Aug-2024

Summary

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Gene symbol
COG5
Gene description
component of oligomeric golgi complex 5
Locus tag
A306_04849
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See COG5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 1 NC_088602.1 (196414190..196603228)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973179.1 (1933945..2122700, complement)

Chromosome 1 - NC_088602.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 26 member 4 Neighboring gene B cell receptor associated protein 29 Neighboring gene dihydrouridine synthase 4 like Neighboring gene G protein-coupled receptor 22 Neighboring gene uncharacterized LOC110365450 Neighboring gene HMG-box transcription factor 1 Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5
Names
oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088602.1 Reference bColLiv1.pat.W.v2

    Range
    196414190..196603228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065049026.1 → XP_064905098.1  conserved oligomeric Golgi complex subunit 5 isoform X1

  2. XM_005498123.3 → XP_005498180.1  conserved oligomeric Golgi complex subunit 5 isoform X2

    UniProtKB/TrEMBL
    A0A2I0MH78
    Conserved Domains (2) summary
    pfam10392
    Location:22 → 144
    COG5; Golgi transport complex subunit 5
    cl25732
    Location:40 → 252
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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