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NTNG1 netrin G1 [ Columba livia (rock pigeon) ]

Gene ID: 102094025, updated on 6-Jun-2024

Summary

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Gene symbol
NTNG1
Gene description
netrin G1
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Also known as
Netrin-G1
Orthologs
human mouse all
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Genomic context

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See NTNG1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 8 NC_088609.1 (20183457..20339569, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973192.1 (6030808..6185494)

Chromosome 8 - NC_088609.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 24 Neighboring gene vav guanine nucleotide exchange factor 3 Neighboring gene uncharacterized LOC110362127 Neighboring gene uncharacterized LOC110362122 Neighboring gene uncharacterized LOC110362081 Neighboring gene uncharacterized LOC135580121 Neighboring gene uncharacterized LOC110361106

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
netrin-G1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088609.1 Reference bColLiv1.pat.W.v2

    Range
    20183457..20339569 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065072461.1 → XP_064928533.1  netrin-G1 isoform X3

  2. XM_065072458.1 → XP_064928530.1  netrin-G1 isoform X1

    UniProtKB/TrEMBL
    A0A2I0ME13

  3. XM_065072462.1 → XP_064928534.1  netrin-G1 isoform X4

  4. XM_065072464.1 → XP_064928536.1  netrin-G1 isoform X6

  5. XM_065072459.1 → XP_064928531.1  netrin-G1 isoform X2

  6. XM_065072463.1 → XP_064928535.1  netrin-G1 isoform X5

  7. XM_065072466.1 → XP_064928538.1  netrin-G1 isoform X8

  8. XM_065072465.1 → XP_064928537.1  netrin-G1 isoform X7

  9. XM_065072467.1 → XP_064928539.1  netrin-G1 isoform X9

  10. XM_065072468.1 → XP_064928540.1  netrin-G1 isoform X10

  11. XM_013368017.3 → XP_013223471.1  netrin-G1 isoform X1

    UniProtKB/TrEMBL
    A0A2I0ME13
    Conserved Domains (3) summary
    cd00054
    Location:517 → 541
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:462 → 506
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00055
    Location:71 → 295
    Laminin_N; Laminin N-terminal (Domain VI)
Nucleotide Protein
Heading Accession and Version

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