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MAN1A1 mannosidase alpha class 1A member 1 [ Columba livia (rock pigeon) ]

Gene ID: 102093752, updated on 3-Aug-2024

Summary

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Gene symbol
MAN1A1
Gene description
mannosidase alpha class 1A member 1
Locus tag
A306_05545
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See MAN1A1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 3 NC_088604.1 (52790727..52940119, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973439.1 (4573125..4720282)

Chromosome 3 - NC_088604.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C10orf95-like Neighboring gene minichromosome maintenance 9 homologous recombination repair factor Neighboring gene family with sequence similarity 184 member A Neighboring gene uncharacterized LOC110362605 Neighboring gene uncharacterized LOC110362622

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannosyl-oligosaccharide 1,2-alpha-mannosidase IA
Names
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088604.1 Reference bColLiv1.pat.W.v2

    Range
    52790727..52940119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065056759.1 → XP_064912831.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IA isoform X1

  2. XM_021294461.2 → XP_021150136.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IA isoform X2

    UniProtKB/TrEMBL
    A0A2I0MV92
    Conserved Domains (1) summary
    pfam01532
    Location:34 → 472
    Glyco_hydro_47; Glycosyl hydrolase family 47
Nucleotide Protein
Heading Accession and Version

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