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SCD5 stearoyl-CoA desaturase 5 [ Columba livia (rock pigeon) ]

Gene ID: 102092811, updated on 6-Jun-2024

Summary

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Gene symbol
SCD5
Gene description
stearoyl-CoA desaturase 5
Locus tag
A306_06594
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See SCD5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 4 NC_088605.1 (53609161..53640912, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973188.1 (1183411..1200983)

Chromosome 4 - NC_088605.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110359804 Neighboring gene heterogeneous nuclear ribonucleoprotein D like Neighboring gene enolase-phosphatase 1 Neighboring gene transmembrane protein 150C Neighboring gene SEC31 homolog A, COPII coat complex component Neighboring gene THAP domain containing 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stearoyl-CoA desaturase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088605.1 Reference bColLiv1.pat.W.v2

    Range
    53609161..53640912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065061716.1 → XP_064917788.1  stearoyl-CoA desaturase 5 isoform X1

    UniProtKB/TrEMBL
    A0A2I0MGZ7

  2. XM_065061717.1 → XP_064917789.1  stearoyl-CoA desaturase 5 isoform X2

    UniProtKB/TrEMBL
    A0A2I0MGZ7
Nucleotide Protein
Heading Accession and Version

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