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PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha [ Columba livia (rock pigeon) ]

Gene ID: 102091605, updated on 3-Aug-2024

Summary

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Gene symbol
PIP4K2A
Gene description
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
Locus tag
A306_13983
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See PIP4K2A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 2 NC_088603.1 (19922436..20042500)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973238.1 (188414..241659, complement)

Chromosome 2 - NC_088603.1Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing 3 Neighboring gene uncharacterized LOC135578423 Neighboring gene sperm associated antigen 6 Neighboring gene uncharacterized LOC135578425

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 1-phosphatidylinositol-5-phosphate 4-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
Names
Phosphatidylinositol-5-phosphate 4-kinase type-2 alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088603.1 Reference bColLiv1.pat.W.v2

    Range
    19922436..20042500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065050790.1 → XP_064906862.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X5

  2. XM_065050786.1 → XP_064906858.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X2

  3. XM_065050787.1 → XP_064906859.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X3

  4. XM_065050785.1 → XP_064906857.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X1

  5. XM_065050789.1 → XP_064906861.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X4

    UniProtKB/TrEMBL
    A0A2I0MRD4

  6. XM_065050788.1 → XP_064906860.1  phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X4

    UniProtKB/TrEMBL
    A0A2I0MRD4
Nucleotide Protein
Heading Accession and Version

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