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CERS6 ceramide synthase 6 [ Columba livia (rock pigeon) ]

Gene ID: 102089975, updated on 3-Aug-2024

Summary

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Gene symbol
CERS6
Gene description
ceramide synthase 6
Locus tag
A306_07525
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See CERS6 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 7 NC_088608.1 (20538810..20659052)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973190.1 (5063086..5183235)

Chromosome 7 - NC_088608.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 39 Neighboring gene uncharacterized LOC135579915 Neighboring gene uncharacterized LOC135579916 Neighboring gene SPC25 component of NDC80 kinetochore complex Neighboring gene glucose-6-phosphatase catalytic subunit 2 Neighboring gene ATP binding cassette subfamily B member 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 6
Names
LAG1 longevity assurance like protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088608.1 Reference bColLiv1.pat.W.v2

    Range
    20538810..20659052
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065069757.1 → XP_064925829.1  ceramide synthase 6 isoform X1

  2. XM_065069758.1 → XP_064925830.1  ceramide synthase 6 isoform X2

  3. XM_065069759.1 → XP_064925831.1  ceramide synthase 6 isoform X4

  4. XM_021292000.2 → XP_021147675.2  ceramide synthase 6 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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