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LOC102089679 alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [ Columba livia (rock pigeon) ]

Gene ID: 102089679, updated on 3-Aug-2024

Summary

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Gene symbol
LOC102089679
Gene description
alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
Locus tag
A306_03846
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
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Genomic context

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See LOC102089679 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 22 NC_088623.1 (2329048..2338615, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973350.1 (671770..678829)

Chromosome 22 - NC_088623.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin like and fibronectin type III domain containing 1 Neighboring gene uncharacterized LOC135576037 Neighboring gene transmembrane protein 9 Neighboring gene transmembrane protein 183A Neighboring gene PTPRF interacting protein alpha 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088623.1 Reference bColLiv1.pat.W.v2

    Range
    2329048..2338615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021291483.2 → XP_021147158.2  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

  2. XM_005505339.3 → XP_005505396.2  alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

Nucleotide Protein
Heading Accession and Version

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