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ACAA1 acetyl-CoA acyltransferase 1 [ Columba livia (rock pigeon) ]

Gene ID: 102088336, updated on 3-Aug-2024

Summary

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Gene symbol
ACAA1
Gene description
acetyl-CoA acyltransferase 1
Locus tag
A306_08731
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See ACAA1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 2 NC_088603.1 (5748247..5762109, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973530.1 (183528..197285)

Chromosome 2 - NC_088603.1Genomic Context describing neighboring genes Neighboring gene phospholipase C delta 1 Neighboring gene DLEC1 cilia and flagella associated protein Neighboring gene mitogen-activated protein kinase kinase kinase 3 Neighboring gene cryptochrome DASH-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA C-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phenylacetate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-ketoacyl-CoA thiolase, peroxisomal
Names
3-ketoacyl-CoA thiolase B, peroxisomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088603.1 Reference bColLiv1.pat.W.v2

    Range
    5748247..5762109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065050356.1 → XP_064906428.1  3-ketoacyl-CoA thiolase, peroxisomal isoform X2

  2. XM_065050355.1 → XP_064906427.1  3-ketoacyl-CoA thiolase, peroxisomal isoform X1

Nucleotide Protein
Heading Accession and Version

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