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PMM2 phosphomannomutase 2 [ Columba livia (rock pigeon) ]

Gene ID: 102086674, updated on 3-Aug-2024

Summary

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Gene symbol
PMM2
Gene description
phosphomannomutase 2
Locus tag
A306_06966
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See PMM2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 15 NC_088616.1 (6790617..6799319)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973488.1 (597101..604244, complement)

Chromosome 15 - NC_088616.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene 4-aminobutyrate aminotransferase Neighboring gene transmembrane protein 186 Neighboring gene calcium regulated heat stable protein 1 Neighboring gene uncharacterized LOC110363225

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphomannomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphomannomutase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088616.1 Reference bColLiv1.pat.W.v2

    Range
    6790617..6799319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065030782.1 → XP_064886854.1  phosphomannomutase 2 isoform X2

  2. XM_065030781.1 → XP_064886853.1  phosphomannomutase 2 isoform X1

  3. XM_065030783.1 → XP_064886855.1  phosphomannomutase 2 isoform X3

RNA

  1. XR_010466327.1 RNA Sequence

  2. XR_010466326.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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