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CD8A CD8 subunit alpha [ Columba livia (rock pigeon) ]

Gene ID: 102085944, updated on 3-Aug-2024

Summary

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Gene symbol
CD8A
Gene description
CD8 subunit alpha
Locus tag
A306_08880
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See CD8A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 4 NC_088605.1 (6392868..6402060)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973582.1 (2038157..2047825, complement)

Chromosome 4 - NC_088605.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135579314 Neighboring gene uncharacterized LOC102089131 Neighboring gene uncharacterized LOC135579315 Neighboring gene CD8 subunit beta Neighboring gene required for meiotic nuclear division 5 homolog A Neighboring gene ring finger protein 103

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in T cell mediated immunity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytotoxic T cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD8 alpha chain
Names
CD8a molecule

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088605.1 Reference bColLiv1.pat.W.v2

    Range
    6392868..6402060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005509953.3 → XP_005510010.2  T-cell surface glycoprotein CD8 alpha chain

  2. XM_065060261.1 → XP_064916333.1  T-cell surface glycoprotein CD8 alpha chain

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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