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GANC glucosidase alpha, neutral C [ Columba livia (rock pigeon) ]

Gene ID: 102084706, updated on 3-Aug-2024

Summary

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Gene symbol
GANC
Gene description
glucosidase alpha, neutral C
Locus tag
A306_07963
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See GANC in Genome Data Viewer
Location:
chromosome: 5
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 5 NC_088606.1 (40140510..40168609, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973262.1 (3879042..3908285)

Chromosome 5 - NC_088606.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 106 Neighboring gene calpain 3 Neighboring gene uncharacterized LOC135579666 Neighboring gene transmembrane protein 87A Neighboring gene VPS39 subunit of HOPS complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral alpha-glucosidase C
Names
Neutral alpha-glucosidase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088606.1 Reference bColLiv1.pat.W.v2

    Range
    40140510..40168609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065065887.1 → XP_064921959.1  neutral alpha-glucosidase C isoform X1

  2. XM_065065888.1 → XP_064921960.1  neutral alpha-glucosidase C isoform X2

  3. XM_065065889.1 → XP_064921961.1  neutral alpha-glucosidase C isoform X3

RNA

  1. XR_010473243.1 RNA Sequence

  2. XR_010473240.1 RNA Sequence

  3. XR_010473245.1 RNA Sequence

  4. XR_010473242.1 RNA Sequence

  5. XR_010473241.1 RNA Sequence

  6. XR_010473244.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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