SHMT2 serine hydroxymethyltransferase 2 [Columba livia (rock pigeon)] - Gene

Summary

Gene symbol: SHMT2
Gene description: serine hydroxymethyltransferase 2
Locus tag: A306_15444
Gene type: protein coding
RefSeq status: MODEL
Organism: Columba livia
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_05	current	bColLiv1.pat.W.v2 (GCF_036013475.1)	29	NC_088630.1 (1535586..1540664)
102	previous assembly	Cliv_1.0 (GCF_000337935.1)	Unplaced Scaffold	NW_004974058.1 (121899..126056, complement)

Chromosome 29 - NC_088630.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables cobalt ion binding	IEA Inferred from Electronic Annotation more info	PubMed
enables glycine hydroxymethyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables pyridoxal phosphate binding	IEA Inferred from Electronic Annotation more info	PubMed
enables serine binding	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in L-serine catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in folic acid metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in glycine biosynthetic process from serine	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of oxidative phosphorylation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in tetrahydrofolate interconversion	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of BRISC complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in mitochondrial matrix	IEA Inferred from Electronic Annotation more info	PubMed