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UGP2 UDP-glucose pyrophosphorylase 2 [ Columba livia (rock pigeon) ]

Gene ID: 102084284, updated on 3-Aug-2024

Summary

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Gene symbol
UGP2
Gene description
UDP-glucose pyrophosphorylase 2
Locus tag
A306_02264
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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See UGP2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 3 NC_088604.1 (111800589..111827008)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973294.1 (212860..241623, complement)

Chromosome 3 - NC_088604.1Genomic Context describing neighboring genes Neighboring gene WD repeat containing planar cell polarity effector Neighboring gene uncharacterized LOC135579164 Neighboring gene malate dehydrogenase 1 Neighboring gene VPS54 subunit of GARP complex Neighboring gene pellino E3 ubiquitin protein ligase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UTP:glucose-1-phosphate uridylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UTP--glucose-1-phosphate uridylyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088604.1 Reference bColLiv1.pat.W.v2

    Range
    111800589..111827008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065059246.1 → XP_064915318.1  UTP--glucose-1-phosphate uridylyltransferase isoform X1

  2. XM_005503748.2 → XP_005503805.1  UTP--glucose-1-phosphate uridylyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A2I0LT27
    Conserved Domains (1) summary
    pfam01704
    Location:57 → 473
    UDPGP; UTP--glucose-1-phosphate uridylyltransferase
Nucleotide Protein
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