U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [ Columba livia (rock pigeon) ]

Gene ID: 102083553, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
PAPSS2
Gene description
3'-phosphoadenosine 5'-phosphosulfate synthase 2
Locus tag
A306_03696
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PAPSS2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 6 NC_088607.1 (36559013..36585897, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973347.1 (2294278..2318731)

Chromosome 6 - NC_088607.1Genomic Context describing neighboring genes Neighboring gene renalase, FAD dependent amine oxidase Neighboring gene uncharacterized LOC110360727 Neighboring gene phosphatase and tensin homolog Neighboring gene ATPase family AAA domain containing 1 Neighboring gene multiple inositol-polyphosphate phosphatase 1 Neighboring gene sphingomyelin synthase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables adenylylsulfate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfate adenylyltransferase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfate assimilation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2
Names
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthetase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088607.1 Reference bColLiv1.pat.W.v2

    Range
    36559013..36585897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065068146.1 → XP_064924218.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform X2

  2. XM_065068145.1 → XP_064924217.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform X1

  3. XM_065068144.1 → XP_064924216.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.