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TTC12 tetratricopeptide repeat domain 12 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102073904, updated on 3-Aug-2024

Summary

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Gene symbol
TTC12
Gene description
tetratricopeptide repeat domain 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See TTC12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081833.1 (79607..98919)

NW_005081833.1Genomic Context describing neighboring genes Neighboring gene neural cell adhesion molecule 1 Neighboring gene ankyrin repeat and kinase domain containing 1 Neighboring gene dopamine receptor D2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081833 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081833.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    79607..98919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014273019.2 → XP_014128494.2  tetratricopeptide repeat protein 12

    Conserved Domains (3) summary
    sd00006
    Location:117 → 145
    TPR; TPR repeat [structural motif]
    sd00043
    Location:528 → 561
    ARM; armadillo repeat [structural motif]
    cl26005
    Location:116 → 238
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
Nucleotide Protein
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