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CHGA chromogranin A [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102073634, updated on 3-Aug-2024

Summary

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Gene symbol
CHGA
Gene description
chromogranin A
See related
Ensembl:ENSZALG00000003477
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See CHGA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081549.1 (3941253..3953791)

NW_005081549.1Genomic Context describing neighboring genes Neighboring gene golgin A5 Neighboring gene uncharacterized LOC106629224 Neighboring gene inositol-tetrakisphosphate 1-kinase Neighboring gene lysosomal enzyme trafficking factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081549 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of catecholamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromaffin granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromogranin-A
Names
chromogranin A (parathyroid secretory protein 1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081549.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    3941253..3953791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014264537.1 → XP_014120012.1  chromogranin-A

    UniProtKB/TrEMBL
    A0A8D2M5N4, A0A8D2M851
    Related
    ENSZALP00000003492.1, ENSZALT00000005556.1
    Conserved Domains (1) summary
    pfam01271
    Location:25 → 470
    Granin; Granin (chromogranin or secretogranin)
Nucleotide Protein
Heading Accession and Version

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