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CTNS cystinosin, lysosomal cystine transporter [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102072856, updated on 3-Aug-2024

Summary

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Gene symbol
CTNS
Gene description
cystinosin, lysosomal cystine transporter
See related
Ensembl:ENSZALG00000015091
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See CTNS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081728.1 (637130..643906, complement)

NW_005081728.1Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 6 Neighboring gene Tax1 binding protein 3 Neighboring gene sedoheptulokinase Neighboring gene transient receptor potential cation channel subfamily V member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081728 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-cystine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-cystine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystinosin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081728.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    637130..643906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005493533.3 → XP_005493590.1  cystinosin

    See identical proteins and their annotated locations for XP_005493590.1

    UniProtKB/TrEMBL
    A0A8D2ND36
    Conserved Domains (2) summary
    TIGR00951
    Location:128 → 358
    2A43; Lysosomal Cystine Transporter
    pfam04193
    Location:129 → 186
    PQ-loop; PQ loop repeat

  2. XM_005493534.3 → XP_005493591.1  cystinosin

    See identical proteins and their annotated locations for XP_005493591.1

    UniProtKB/TrEMBL
    A0A8D2ND36
    Related
    ENSZALP00000018934.1, ENSZALT00000024980.1
    Conserved Domains (2) summary
    TIGR00951
    Location:128 → 358
    2A43; Lysosomal Cystine Transporter
    pfam04193
    Location:129 → 186
    PQ-loop; PQ loop repeat
Nucleotide Protein
Heading Accession and Version

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