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TOR1AIP1 torsin 1A interacting protein 1 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102071416, updated on 3-Aug-2024

Summary

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Gene symbol
TOR1AIP1
Gene description
torsin 1A interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See TOR1AIP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081631.1 (2334221..2344246)

NW_005081631.1Genomic Context describing neighboring genes Neighboring gene ADAMTS-like protein 2 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene centrosomal protein 350 Neighboring gene quiescin sulfhydryl oxidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081631 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1
Names
torsin A interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081631.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    2334221..2344246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014269287.2 → XP_014124762.1  torsin-1A-interacting protein 1

    Conserved Domains (1) summary
    pfam05609
    Location:197 → 414
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
Heading Accession and Version

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