U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ALDH1A3 aldehyde dehydrogenase 1 family member A3 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102071162, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
ALDH1A3
Gene description
aldehyde dehydrogenase 1 family member A3
See related
Ensembl:ENSZALG00000005829
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ALDH1A3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081550.1 (9143655..9187463)

NW_005081550.1Genomic Context describing neighboring genes Neighboring gene protein Lines homolog 1 Neighboring gene ankyrin repeat and SOCS box containing 7 Neighboring gene leucine rich repeat kinase 1 Neighboring gene chondroitin sulfate synthase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005081550 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular aldehyde metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
aldehyde dehydrogenase family 1 member A3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081550.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    9143655..9187463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026791303.1 → XP_026647104.1  aldehyde dehydrogenase family 1 member A3 isoform X2

    Conserved Domains (1) summary
    cl11961
    Location:1 → 416
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  2. XM_026791304.1 → XP_026647105.1  aldehyde dehydrogenase family 1 member A3 isoform X2

    Conserved Domains (1) summary
    cl11961
    Location:1 → 416
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  3. XM_005483468.3 → XP_005483525.1  aldehyde dehydrogenase family 1 member A3 isoform X1

    See identical proteins and their annotated locations for XP_005483525.1

    UniProtKB/TrEMBL
    A0A8D2MC28
    Related
    ENSZALP00000006385.1, ENSZALT00000009315.1
    Conserved Domains (1) summary
    cd07141
    Location:27 → 506
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.