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AGXT alanine--glyoxylate and serine--pyruvate aminotransferase [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102067486, updated on 18-Sep-2024

Summary

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Gene symbol
AGXT
Gene description
alanine--glyoxylate and serine--pyruvate aminotransferase
See related
Ensembl:ENSZALG00000003500
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See AGXT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081617.1 (1590025..1593399)

NW_005081617.1Genomic Context describing neighboring genes Neighboring gene ILK associated serine/threonine phosphatase Neighboring gene kinesin family member 1A Neighboring gene mab-21 like 4 Neighboring gene sushi, nidogen and EGF like domains 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081617 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine-pyruvate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-glyoxylate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine biosynthetic process, by transamination of glyoxylate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine--pyruvate aminotransferase
Names
alanine-glyoxylate aminotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081617.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    1590025..1593399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014268840.2 → XP_014124315.2  serine--pyruvate aminotransferase

    UniProtKB/TrEMBL
    A0A8D2QBF1
    Related
    ENSZALP00000003534.1, ENSZALT00000005600.1
    Conserved Domains (1) summary
    cd06451
    Location:49 → 410
    AGAT_like; Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), ...
Nucleotide Protein
Heading Accession and Version

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