U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GMDS GDP-mannose 4,6-dehydratase [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102065193, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
GMDS
Gene description
GDP-mannose 4,6-dehydratase
See related
Ensembl:ENSZALG00000014504
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GMDS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081542.1 (5380830..5792119)

NW_005081542.1Genomic Context describing neighboring genes Neighboring gene WRN helicase interacting protein 1 Neighboring gene myosin light chain kinase family member 4 Neighboring gene uncharacterized LOC113458552 Neighboring gene forkhead box F2 Neighboring gene uncharacterized LOC102065513

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005081542 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-mannose 4,6-dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GDP-mannose 4,6 dehydratase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081542.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    5380830..5792119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005481685.3 → XP_005481742.1  GDP-mannose 4,6 dehydratase

    UniProtKB/TrEMBL
    A0A8D2N6A4
    Related
    ENSZALP00000018047.1, ENSZALT00000023928.1
    Conserved Domains (2) summary
    TIGR01472
    Location:30 → 372
    gmd; GDP-mannose 4,6-dehydratase
    pfam16363
    Location:33 → 364
    GDP_Man_Dehyd; GDP-mannose 4,6 dehydratase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.