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CERS6 ceramide synthase 6 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102062883, updated on 3-Aug-2024

Summary

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Gene symbol
CERS6
Gene description
ceramide synthase 6
See related
Ensembl:ENSZALG00000017172
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See CERS6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081554.1 (1859429..1955454)

NW_005081554.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-galactosyltransferase 1 Neighboring gene uncharacterized LOC102062760 Neighboring gene serine/threonine kinase 39 Neighboring gene uncharacterized LOC113458886 Neighboring gene glucose-6-phosphatase catalytic subunit 2 Neighboring gene SPC25 component of NDC80 kinetochore complex Neighboring gene ATP binding cassette subfamily B member 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081554 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081554.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    1859429..1955454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005484026.3 → XP_005484083.1  ceramide synthase 6

    UniProtKB/TrEMBL
    A0A8D2QJR6, A0A8D2QKB5
    Related
    ENSZALP00000022038.1, ENSZALT00000028704.1
    Conserved Domains (2) summary
    cd00086
    Location:80 → 127
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain
Nucleotide Protein
Heading Accession and Version

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