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CRPPA CDP-L-ribitol pyrophosphorylase A [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102062820, updated on 3-Aug-2024

Summary

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Gene symbol
CRPPA
Gene description
CDP-L-ribitol pyrophosphorylase A
See related
Ensembl:ENSZALG00000010831
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Also known as
ISPD
Orthologs
human mouse all
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Genomic context

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See CRPPA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081540.1 (3998925..4105476, complement)

NW_005081540.1Genomic Context describing neighboring genes Neighboring gene alkylglycerol monooxygenase Neighboring gene mesenchyme homeobox 2 Neighboring gene uncharacterized LOC113460739 Neighboring gene sclerostin domain containing 1 Neighboring gene leucine rich repeat containing 72 Neighboring gene ankyrin repeat and MYND domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081540 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-ribitol-5-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
D-ribitol-5-phosphate cytidylyltransferase
Names
isoprenoid synthase domain containing

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081540.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    3998925..4105476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005480838.3 → XP_005480895.1  D-ribitol-5-phosphate cytidylyltransferase

    UniProtKB/TrEMBL
    A0A8D2QFH6
    Related
    ENSZALP00000012979.1, ENSZALT00000017729.1
    Conserved Domains (1) summary
    cd02516
    Location:15 → 242
    CDP-ME_synthetase; CDP-ME synthetase is involved in mevalonate-independent isoprenoid production
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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