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HAO2 hydroxyacid oxidase 2 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102062700, updated on 3-Aug-2024

Summary

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Gene symbol
HAO2
Gene description
hydroxyacid oxidase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See HAO2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081570.1 (1019674..1027772, complement)

NW_005081570.1Genomic Context describing neighboring genes Neighboring gene mannosidase alpha class 1A member 2 Neighboring gene 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Neighboring gene tryptophanyl tRNA synthetase 2, mitochondrial Neighboring gene T-box transcription factor 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081570 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyacid oxidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081570.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    1019674..1027772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005486073.3 → XP_005486130.1  hydroxyacid oxidase 2

    UniProtKB/TrEMBL
    A0A8D2NHJ0
    Conserved Domains (2) summary
    cd02809
    Location:7 → 347
    alpha_hydroxyacid_oxid_FMN; Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate ...
    pfam01070
    Location:14 → 351
    FMN_dh; FMN-dependent dehydrogenase
Nucleotide Protein
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