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TAB2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102062120, updated on 3-Aug-2024

Summary

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Gene symbol
TAB2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
See related
Ensembl:ENSZALG00000010186
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See TAB2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081589.1 (272401..315115)

NW_005081589.1Genomic Context describing neighboring genes Neighboring gene uronyl 2-sulfotransferase Neighboring gene uncharacterized LOC113459361 Neighboring gene zinc finger CCCH-type containing 12D Neighboring gene peptidylprolyl isomerase like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081589 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081589.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    272401..315115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005487556.3 → XP_005487613.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8D2MTY4
    Related
    ENSZALP00000012086.1, ENSZALT00000016672.1
    Conserved Domains (4) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl00087
    Location:538 → 606
    HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

  2. XM_026793812.1 → XP_026649613.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

Nucleotide Protein
Heading Accession and Version

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