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LOC102061929 carbohydrate sulfotransferase 9 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102061929, updated on 3-Aug-2024

Summary

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Gene symbol
LOC102061929
Gene description
carbohydrate sulfotransferase 9
See related
Ensembl:ENSZALG00000000287
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Also known as
CHST9
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081536.1 (1037652..1126589, complement)

NW_005081536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113458671 Neighboring gene aquaporin 4 Neighboring gene cadherin 2 Neighboring gene uncharacterized LOC113458700

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081536 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9
Names
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081536.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    1037652..1126589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026791038.1 → XP_026646839.1  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8D2M1A7
    Related
    ENSZALP00000000247.1, ENSZALT00000000395.1

  2. XM_005479259.3 → XP_005479316.1  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8D2M1A7
    Related
    ENSZALP00000000256.1, ENSZALT00000000410.1
    Conserved Domains (1) summary
    pfam03567
    Location:177 → 406
    Sulfotransfer_2; Sulfotransferase family

  3. XM_026791034.1 → XP_026646835.1  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A8D2M1A7
    Related
    ENSZALP00000000262.1, ENSZALT00000000420.1

  4. XM_026791045.1 → XP_026646846.1  carbohydrate sulfotransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A8D2M1B6

  5. XM_026791043.1 → XP_026646844.1  carbohydrate sulfotransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A8D2M1B6
    Related
    ENSZALP00000000268.1, ENSZALT00000000433.1
    Conserved Domains (1) summary
    pfam03567
    Location:160 → 389
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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