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ACADSB acyl-CoA dehydrogenase short/branched chain [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102061915, updated on 3-Aug-2024

Summary

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Gene symbol
ACADSB
Gene description
acyl-CoA dehydrogenase short/branched chain
See related
Ensembl:ENSZALG00000005247
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See ACADSB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081788.1 (594786..606285, complement)

NW_005081788.1Genomic Context describing neighboring genes Neighboring gene BUB3 mitotic checkpoint protein Neighboring gene H6 family homeobox 2 Neighboring gene IKAROS family zinc finger 5 Neighboring gene phosphoseryl-tRNA kinase Neighboring gene disintegrin and metalloproteinase domain-containing protein 9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081788 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081788.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    594786..606285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014272619.2 → XP_014128094.2  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8D2MAG8
    Related
    ENSZALP00000005653.1, ENSZALT00000008356.1
    Conserved Domains (1) summary
    cd01158
    Location:53 → 423
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
Nucleotide Protein
Heading Accession and Version

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