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ECHDC1 ethylmalonyl-CoA decarboxylase 1 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102061724, updated on 3-Aug-2024

Summary

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Gene symbol
ECHDC1
Gene description
ethylmalonyl-CoA decarboxylase 1
See related
Ensembl:ENSZALG00000016131
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See ECHDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081591.1 (1551577..1595334)

NW_005081591.1Genomic Context describing neighboring genes Neighboring gene MTCL family member 3 Neighboring gene KIAA0408 ortholog Neighboring gene ring finger protein 146 Neighboring gene uncharacterized LOC102062773

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081591 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enoyl-CoA hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylmalonyl-CoA decarboxylase
Names
enoyl CoA hydratase domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081591.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    1551577..1595334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014267544.2 → XP_014123019.1  ethylmalonyl-CoA decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A8D2NC25
    Conserved Domains (1) summary
    cd06558
    Location:51 → 216
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  2. XM_005487735.3 → XP_005487792.1  ethylmalonyl-CoA decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A8D2NC25
    Related
    ENSZALP00000020529.1, ENSZALT00000026814.1
    Conserved Domains (1) summary
    cd06558
    Location:51 → 216
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  3. XM_026793878.1 → XP_026649679.1  ethylmalonyl-CoA decarboxylase isoform X2

    Conserved Domains (1) summary
    cd06558
    Location:1 → 141
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

  4. XM_026793877.1 → XP_026649678.1  ethylmalonyl-CoA decarboxylase isoform X2

Nucleotide Protein
Heading Accession and Version

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