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UGDH UDP-glucose 6-dehydrogenase [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102060817, updated on 3-Aug-2024

Summary

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Gene symbol
UGDH
Gene description
UDP-glucose 6-dehydrogenase
See related
Ensembl:ENSZALG00000017590
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See UGDH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081639.1 (953262..967877, complement)

NW_005081639.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9 Neighboring gene lipoic acid synthetase Neighboring gene small integral membrane protein 14 Neighboring gene uncharacterized LOC102061161 Neighboring gene ubiquitin conjugating enzyme E2 K

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081639 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucose 6-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose 6-dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081639.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    953262..967877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005490512.3 → XP_005490569.1  UDP-glucose 6-dehydrogenase

    UniProtKB/TrEMBL
    A0A8D2NER7
    Related
    ENSZALP00000022661.1, ENSZALT00000029444.1
    Conserved Domains (4) summary
    PLN02353
    Location:4 → 464
    PLN02353; probable UDP-glucose 6-dehydrogenase
    pfam00984
    Location:214 → 309
    UDPG_MGDP_dh; UDP-glucose/GDP-mannose dehydrogenase family, central domain
    pfam03720
    Location:332 → 446
    UDPG_MGDP_dh_C; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
    pfam03721
    Location:6 → 193
    UDPG_MGDP_dh_N; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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