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PIGO phosphatidylinositol glycan anchor biosynthesis class O [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102060760, updated on 3-Aug-2024

Summary

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Gene symbol
PIGO
Gene description
phosphatidylinositol glycan anchor biosynthesis class O
See related
Ensembl:ENSZALG00000008501
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See PIGO in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081668.1 (1141384..1158440, complement)

NW_005081668.1Genomic Context describing neighboring genes Neighboring gene valosin containing protein Neighboring gene FA complementation group G Neighboring gene stomatin like 2 Neighboring gene atos homolog B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081668 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081668.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    1141384..1158440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005491731.3 → XP_005491788.1  GPI ethanolamine phosphate transferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A8D2MMM0
    Related
    ENSZALP00000009992.1, ENSZALT00000013874.1
    Conserved Domains (2) summary
    COG1524
    Location:46 → 294
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    cd16023
    Location:63 → 338
    GPI_EPT_3; GPI ethanolamine phosphate transferase 3, PIG-O

  2. XM_026796272.1 → XP_026652073.1  GPI ethanolamine phosphate transferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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