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GYG1 glycogenin 1 [ Zonotrichia albicollis (white-throated sparrow) ]

Gene ID: 102060527, updated on 3-Aug-2024

Summary

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Gene symbol
GYG1
Gene description
glycogenin 1
See related
Ensembl:ENSZALG00000016678
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See GYG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081856.1 (17369..31555)

NW_005081856.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113460354 Neighboring gene tubulin alpha-3 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005081856 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zonotrichia_albicollis-1.0.1

Genomic

  1. NW_005081856.1 Reference Zonotrichia_albicollis-1.0.1

    Range
    17369..31555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005495699.3 → XP_005495756.3  glycogenin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8D2ND55
    Conserved Domains (1) summary
    cd02537
    Location:35 → 286
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_026798312.1 → XP_026654113.1  glycogenin-1 isoform X3

    UniProtKB/TrEMBL
    A0A8D2ND55
    Related
    ENSZALP00000021284.1, ENSZALT00000027791.1
    Conserved Domains (1) summary
    cd02537
    Location:35 → 286
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  3. XM_026798311.1 → XP_026654112.1  glycogenin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8D2ND55
    Related
    ENSZALP00000021285.1, ENSZALT00000027792.1
    Conserved Domains (1) summary
    cd02537
    Location:18 → 269
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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