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TBXAS1 thromboxane A synthase 1 [ Falco cherrug (Saker falcon) ]

Gene ID: 102058879, updated on 3-Aug-2024

Summary

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Gene symbol
TBXAS1
Gene description
thromboxane A synthase 1
See related
EnsemblRapid:ENSFCHG00000000670
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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See TBXAS1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 5 NC_073701.1 (29558586..29789488)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994494.1 (1243371..1474244)

Chromosome 5 - NC_073701.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114014721 Neighboring gene homeodomain interacting protein kinase 2 Neighboring gene protein mono-ADP-ribosyltransferase PARP12 Neighboring gene Spi-C transcription factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thromboxane-A synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thromboxane-A synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073701.1 Reference bFalChe1.pri Primary Assembly

    Range
    29558586..29789488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027799407.2 → XP_027655208.1  thromboxane-A synthase isoform X3

    Conserved Domains (1) summary
    cl41757
    Location:76 → 424
    cytochrome_P450; cytochrome P450 (CYP) superfamily

  2. XM_005435041.3 → XP_005435098.1  thromboxane-A synthase isoform X1

    Related
    ENSFCHP00000000986.1
    Conserved Domains (1) summary
    cl41757
    Location:76 → 529
    cytochrome_P450; cytochrome P450 (CYP) superfamily

  3. XM_055712869.1 → XP_055568844.1  thromboxane-A synthase isoform X2

Nucleotide Protein
Heading Accession and Version

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