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ALG12 ALG12 alpha-1,6-mannosyltransferase [ Falco cherrug (Saker falcon) ]

Gene ID: 102049527, updated on 3-Aug-2024

Summary

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Gene symbol
ALG12
Gene description
ALG12 alpha-1,6-mannosyltransferase
See related
EnsemblRapid:ENSFCHG00000014774
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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See ALG12 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 5 NC_073701.1 (87189946..87204531)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994689.1 (117251..130260, complement)

Chromosome 5 - NC_073701.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129736219 Neighboring gene uncharacterized LOC114015701 Neighboring gene uncharacterized LOC129736151 Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene zinc finger BED-type containing 4 Neighboring gene bromodomain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073701.1 Reference bFalChe1.pri Primary Assembly

    Range
    87189946..87204531
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055711246.1 → XP_055567221.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

  2. XM_055711247.1 → XP_055567222.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

  3. XM_005438661.4 → XP_005438718.2  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

    Related
    ENSFCHP00000024625.1
    Conserved Domains (1) summary
    cl21590
    Location:16 → 356
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_027804551.2 → XP_027660352.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    Conserved Domains (1) summary
    cl21590
    Location:29 → 369
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_055711249.1 → XP_055567224.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X3

Nucleotide Protein
Heading Accession and Version

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