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ASAH1 N-acylsphingosine amidohydrolase 1 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102045042, updated on 3-Aug-2024

Summary

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Gene symbol
ASAH1
Gene description
N-acylsphingosine amidohydrolase 1
See related
Ensembl:ENSGFOG00000007100
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See ASAH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054297.1 (16463050..16473627, complement)

NW_005054297.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIE subunit 1-like Neighboring gene pericentriolar material 1 Neighboring gene FSHD region gene 1 Neighboring gene FAT atypical cadherin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054297 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acylsphingosine amidohydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid amide hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acid ceramidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054297.1 Reference GeoFor_1.0

    Range
    16463050..16473627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031066690.1 → XP_030922550.1  acid ceramidase isoform X1

    UniProtKB/TrEMBL
    A0A8N5I688
    Related
    ENSGFOP00000010191.1, ENSGFOT00000010526.1
    Conserved Domains (2) summary
    cd01903
    Location:100 → 345
    Ntn_AC_NAAA; AC_NAAA This conserved domain includes two closely related proteins, acid ceramidase (AC, also known as N-acylsphingosine amidohydrolase), and N-acylethanolamine-hydrolyzing acid amidase (NAAA). AC catalyzes the hydrolysis of ceramide to sphingosine and ...
    pfam15508
    Location:12 → 74
    NAAA-beta; beta subunit of N-acylethanolamine-hydrolyzing acid amidase

  2. XM_031066693.1 → XP_030922553.1  acid ceramidase isoform X2

    UniProtKB/TrEMBL
    A0A8N5I5H2
    Conserved Domains (2) summary
    cd01903
    Location:100 → 293
    Ntn_AC_NAAA; AC_NAAA This conserved domain includes two closely related proteins, acid ceramidase (AC, also known as N-acylsphingosine amidohydrolase), and N-acylethanolamine-hydrolyzing acid amidase (NAAA). AC catalyzes the hydrolysis of ceramide to sphingosine and ...
    pfam15508
    Location:12 → 74
    NAAA-beta; beta subunit of N-acylethanolamine-hydrolyzing acid amidase
Nucleotide Protein
Heading Accession and Version

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