U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DEGS2 delta 4-desaturase, sphingolipid 2 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102044947, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
DEGS2
Gene description
delta 4-desaturase, sphingolipid 2
See related
Ensembl:ENSGFOG00000006670
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DEGS2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054303.1 (4841876..4851837, complement)

NW_005054303.1Genomic Context describing neighboring genes Neighboring gene EMAP like 1 Neighboring gene Enah/Vasp-like Neighboring gene uncharacterized LOC115949494 Neighboring gene YY1 transcription factor Neighboring gene solute carrier family 25 member 29

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005054303 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingolipid delta-4 desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphinganine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sphingolipid delta(4)-desaturase/C4-monooxygenase DES2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054303.1 Reference GeoFor_1.0

    Range
    4841876..4851837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031066279.1 → XP_030922139.1  sphingolipid delta(4)-desaturase/C4-monooxygenase DES2

    UniProtKB/TrEMBL
    A0A8N5F273
    Related
    ENSGFOP00000009550.1, ENSGFOT00000009862.1
    Conserved Domains (1) summary
    cd03508
    Location:1 → 278
    Delta4-sphingolipid-FADS-like; The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.