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DEPTOR DEP domain containing MTOR interacting protein [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102044896, updated on 3-Aug-2024

Summary

Gene symbol
DEPTOR
Gene description
DEP domain containing MTOR interacting protein
See related
Ensembl:ENSGFOG00000006099
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
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Genomic context

See DEPTOR in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054321.1 (3812872..3890604)

NW_005054321.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 2 Neighboring gene DNA replication and sister chromatid cohesion 1 Neighboring gene collagen type XIV alpha 1 chain Neighboring gene mitochondrial ribosomal protein L13

Genomic regions, transcripts, and products

Genomic Sequence:
NW_005054321 Unplaced Scaffold Reference GeoFor_1.0

General protein information

Preferred Names
DEP domain-containing mTOR-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054321.1 Reference GeoFor_1.0

    Range
    3812872..3890604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005420697.2XP_005420754.1  DEP domain-containing mTOR-interacting protein

    UniProtKB/TrEMBL
    A0A6I9HGL1
    Related
    ENSGFOP00000008678.1, ENSGFOT00000008965.1
    Conserved Domains (3) summary
    cd00992
    Location:327391
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04442
    Location:24105
    DEP_1_DEP6; DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
    cl02442
    Location:121205
    DEP; DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is ...