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ST6GALNAC1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102044354, updated on 3-Aug-2024

Summary

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Gene symbol
ST6GALNAC1
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
See related
Ensembl:ENSGFOG00000006919
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human all
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Genomic context

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See ST6GALNAC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054370.1 (1785656..1798181)

NW_005054370.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 23, arginine Neighboring gene jumonji domain containing 6, arginine demethylase and lysine hydroxylase Neighboring gene matrix remodeling associated 7 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 Neighboring gene uncharacterized LOC115948279

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054370 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054370.1 Reference GeoFor_1.0

    Range
    1785656..1798181
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031059967.1 → XP_030915827.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1

    UniProtKB/TrEMBL
    A0A8N5ERV6
    Related
    ENSGFOP00000009933.1, ENSGFOT00000010257.1
    Conserved Domains (2) summary
    pfam00777
    Location:276 → 562
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
    pfam16001
    Location:90 → 264
    DUF4775; Domain of unknown function (DUF4775)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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