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GNPAT glyceronephosphate O-acyltransferase [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102044351, updated on 3-Aug-2024

Summary

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Gene symbol
GNPAT
Gene description
glyceronephosphate O-acyltransferase
See related
Ensembl:ENSGFOG00000011817
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See GNPAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054348.1 (4688710..4705897)

NW_005054348.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 67 Neighboring gene 40S small subunit processome assembly factor 1 Neighboring gene programmed cell death 2 Neighboring gene TATA-box binding protein Neighboring gene proteasome 20S subunit beta 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054348 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerone-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ether lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dihydroxyacetone phosphate acyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054348.1 Reference GeoFor_1.0

    Range
    4688710..4705897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031058782.1 → XP_030914642.1  dihydroxyacetone phosphate acyltransferase

    UniProtKB/TrEMBL
    A0A8N5EPK2
    Related
    ENSGFOP00000017511.1, ENSGFOT00000018087.1
    Conserved Domains (2) summary
    cd07993
    Location:83 → 286
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    PTZ00374
    Location:22 → 451
    PTZ00374; dihydroxyacetone phosphate acyltransferase; Provisional
Nucleotide Protein
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Gene LinkOut

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