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PLEKHA8 pleckstrin homology domain containing A8 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102044127, updated on 3-Aug-2024

Summary

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Gene symbol
PLEKHA8
Gene description
pleckstrin homology domain containing A8
See related
Ensembl:ENSGFOG00000009202
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See PLEKHA8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054333.1 (2048092..2078866, complement)

NW_005054333.1Genomic Context describing neighboring genes Neighboring gene biotinidase Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene collagen like tail subunit of asymmetric acetylcholinesterase Neighboring gene FKBP prolyl isomerase 14 Neighboring gene secernin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054333 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide 1-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ceramide 1-phosphate transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermembrane lipid transfer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family A member 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054333.1 Reference GeoFor_1.0

    Range
    2048092..2078866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031057656.1 → XP_030913516.1  pleckstrin homology domain-containing family A member 8

    UniProtKB/TrEMBL
    A0A8N5ER61
    Related
    ENSGFOP00000013435.1, ENSGFOT00000013872.1
    Conserved Domains (2) summary
    cd01247
    Location:1 → 100
    PH_FAPP1_FAPP2; Four phosphate adaptor protein 1 and 2 Pleckstrin homology (PH) domain
    pfam08718
    Location:281 → 419
    GLTP; Glycolipid transfer protein (GLTP)
Nucleotide Protein
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