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LDLRAD4 low density lipoprotein receptor class A domain containing 4 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102044022, updated on 3-Aug-2024

Summary

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Gene symbol
LDLRAD4
Gene description
low density lipoprotein receptor class A domain containing 4
See related
Ensembl:ENSGFOG00000000728
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054350.1 (3164438..3395079, complement)

NW_005054350.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 210 member A Neighboring gene RNA guanine-7 methyltransferase Neighboring gene centrosomal protein 192 Neighboring gene SEH1 like nucleoporin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054350 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables R-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
low-density lipoprotein receptor class A domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054350.1 Reference GeoFor_1.0

    Range
    3164438..3395079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031058874.1 → XP_030914734.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8N5EMG1
    Related
    ENSGFOP00000001025.1, ENSGFOT00000001043.1
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  2. XM_031058873.1 → XP_030914733.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8N5ENF7
    Related
    ENSGFOP00000001018.1, ENSGFOT00000001036.1
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
Nucleotide Protein
Heading Accession and Version

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