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ACSF3 acyl-CoA synthetase family member 3 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102043804, updated on 3-Aug-2024

Summary

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Gene symbol
ACSF3
Gene description
acyl-CoA synthetase family member 3
See related
Ensembl:ENSGFOG00000004695
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See ACSF3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054373.1 (2329655..2381510)

NW_005054373.1Genomic Context describing neighboring genes Neighboring gene PABPN1 like, cytoplasmic Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene uncharacterized LOC115948314 Neighboring gene ankyrin repeat domain containing 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054373 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables medium-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malonate--CoA ligase ACSF3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054373.1 Reference GeoFor_1.0

    Range
    2329655..2381510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031060165.1 → XP_030916025.1  malonate--CoA ligase ACSF3, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8N5I0W3
    Related
    ENSGFOP00000006669.1, ENSGFOT00000006876.1
    Conserved Domains (1) summary
    cl17068
    Location:61 → 382
    AFD_class_I; Adenylate forming domain, Class I superfamily

  2. XM_005424774.3 → XP_005424831.1  malonate--CoA ligase ACSF3, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6I9HLV9
    Related
    ENSGFOP00000006651.1, ENSGFOT00000006858.1
    Conserved Domains (1) summary
    cd05941
    Location:61 → 579
    MCS; Malonyl-CoA synthetase (MCS)

RNA

  1. XR_004082144.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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