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LOC102043657 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102043657, updated on 3-Aug-2024

Summary

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Gene symbol
LOC102043657
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3B1
See related
Ensembl:ENSGFOG00000004637
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
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Genomic context

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See LOC102043657 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054457.1 (1393960..1421925, complement)

NW_005054457.1Genomic Context describing neighboring genes Neighboring gene tektin 3 Neighboring gene peripheral myelin protein 22 Neighboring gene protoheme IX farnesyltransferase, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054457 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054457.1 Reference GeoFor_1.0

    Range
    1393960..1421925 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031062687.1 → XP_030918547.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1

    UniProtKB/TrEMBL
    A0A8N5I2U5
    Conserved Domains (1) summary
    pfam00685
    Location:1 → 191
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_031062686.1 → XP_030918546.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1

    UniProtKB/TrEMBL
    A0A8N5I2U5
    Related
    ENSGFOP00000006572.1, ENSGFOT00000006771.1
    Conserved Domains (1) summary
    pfam00685
    Location:1 → 191
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
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