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FCSK fucose kinase [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102042406, updated on 3-Aug-2024

Summary

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Gene symbol
FCSK
Gene description
fucose kinase
See related
Ensembl:ENSGFOG00000007852
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Also known as
FUK
Orthologs
human mouse all
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Genomic context

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See FCSK in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054343.1 (2998781..3006412)

NW_005054343.1Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase phosphatase regulatory subunit Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2 Neighboring gene component of oligomeric golgi complex 4 Neighboring gene small nucleolar RNA SNORD111 Neighboring gene splicing factor 3b subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054343 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fucokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-L-fucose salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-fucose kinase
Names
fucokinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054343.1 Reference GeoFor_1.0

    Range
    2998781..3006412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031058488.1 → XP_030914348.1  L-fucose kinase

    UniProtKB/TrEMBL
    A0A8N5HYM6
    Related
    ENSGFOP00000012590.1, ENSGFOT00000013020.1
    Conserved Domains (2) summary
    PRK13412
    Location:348 → 1021
    fkp; bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
    pfam07959
    Location:83 → 477
    Fucokinase; L-fucokinase
Nucleotide Protein
Heading Accession and Version

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