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HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102042170, updated on 3-Aug-2024

Summary

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Gene symbol
HOGA1
Gene description
4-hydroxy-2-oxoglutarate aldolase 1
See related
Ensembl:ENSGFOG00000007950
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See HOGA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054300.1 (6121113..6123741)

NW_005054300.1Genomic Context describing neighboring genes Neighboring gene ubiquitin domain containing 1 Neighboring gene ankyrin repeat domain 2 Neighboring gene MORN repeat containing 4 Neighboring gene phosphatidylinositol 4-kinase type 2 alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054300 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxy-tetrahydrodipicolinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-hydroxy-2-oxoglutarate aldolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054300.1 Reference GeoFor_1.0

    Range
    6121113..6123741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005416429.1 → XP_005416486.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial

    UniProtKB/TrEMBL
    A0A6I9HCU5
    Related
    ENSGFOP00000011461.1, ENSGFOT00000011851.1
    Conserved Domains (1) summary
    cd00408
    Location:44 → 324
    DHDPS-like; Dihydrodipicolinate synthase family
Nucleotide Protein
Heading Accession and Version

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