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PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102040745, updated on 3-Aug-2024

Summary

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Gene symbol
PAPSS2
Gene description
3'-phosphoadenosine 5'-phosphosulfate synthase 2
See related
Ensembl:ENSGFOG00000005509
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See PAPSS2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054615.1 (52858..94859)

NW_005054615.1Genomic Context describing neighboring genes Neighboring gene multiple inositol-polyphosphate phosphatase 1 Neighboring gene ATPase family AAA domain containing 1 Neighboring gene phosphatase and tensin homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054615 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables adenylylsulfate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfate adenylyltransferase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfate assimilation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054615.1 Reference GeoFor_1.0

    Range
    52858..94859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005430286.2 → XP_005430343.1  LOW QUALITY PROTEIN: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2

    UniProtKB/TrEMBL
    A0A6I9HT84
    Related
    ENSGFOP00000009053.1, ENSGFOT00000009346.1
    Conserved Domains (2) summary
    cd00517
    Location:246 → 609
    ATPS; ATP-sulfurylase
    cl17190
    Location:14 → 219
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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