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CHST9 carbohydrate sulfotransferase 9 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102040426, updated on 3-Aug-2024

Summary

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Gene symbol
CHST9
Gene description
carbohydrate sulfotransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See CHST9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054305.1 (3975557..4061233, complement)

NW_005054305.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115949533 Neighboring gene potassium channel tetramerization domain containing 1 Neighboring gene aquaporin 4 Neighboring gene cadherin 2 Neighboring gene desmocollin-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054305 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054305.1 Reference GeoFor_1.0

    Range
    3975557..4061233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031066608.1 → XP_030922468.1  carbohydrate sulfotransferase 9

    UniProtKB/TrEMBL
    A0A8N5F3J6
    Conserved Domains (1) summary
    pfam03567
    Location:154 → 383
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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