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SLC25A20 solute carrier family 25 member 20 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102038450, updated on 3-Aug-2024

Summary

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Gene symbol
SLC25A20
Gene description
solute carrier family 25 member 20
See related
Ensembl:ENSGFOG00000006408
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See SLC25A20 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054317.1 (6319369..6329817, complement)

NW_005054317.1Genomic Context describing neighboring genes Neighboring gene ribonuclease P/MRP subunit p14 Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene hydroxyacyl-thioester dehydratase type 2 Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene secreted frizzled-related protein 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054317 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables low-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054317.1 Reference GeoFor_1.0

    Range
    6319369..6329817 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031056389.1 → XP_030912249.1  mitochondrial carnitine/acylcarnitine carrier protein

    UniProtKB/TrEMBL
    A0A8N5HX82
    Related
    ENSGFOP00000009174.1, ENSGFOT00000009469.1
    Conserved Domains (1) summary
    pfam00153
    Location:32 → 124
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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