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AKR1D1 aldo-keto reductase family 1 member D1 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102038244, updated on 3-Aug-2024

Summary

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Gene symbol
AKR1D1
Gene description
aldo-keto reductase family 1 member D1
See related
Ensembl:ENSGFOG00000002661
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See AKR1D1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054414.1 (1049140..1067679, complement)

NW_005054414.1Genomic Context describing neighboring genes Neighboring gene cystine/glutamate transporter-like Neighboring gene protein mono-ADP-ribosyltransferase PARP12 Neighboring gene tripartite motif containing 24 Neighboring gene cyclin D2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054414 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Delta4-3-oxosteroid 5beta-reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aldose reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ketosteroid monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldo-keto reductase family 1 member D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054414.1 Reference GeoFor_1.0

    Range
    1049140..1067679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031061440.1 → XP_030917300.1  aldo-keto reductase family 1 member D1

    UniProtKB/TrEMBL
    A0A8N5I1X8
    Related
    ENSGFOP00000003748.1, ENSGFOT00000003838.1
    Conserved Domains (1) summary
    cd19109
    Location:24 → 320
    AKR_AKR1D1-3; AKR1D family of aldo-keto reductase (AKR)
Nucleotide Protein
Heading Accession and Version

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