U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ALG1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102038240, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
ALG1
Gene description
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase
See related
Ensembl:ENSGFOG00000010561
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ALG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054383.1 (1326926..1336283, complement)

NW_005054383.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115948364 Neighboring gene eukaryotic elongation factor 2 lysine methyltransferase Neighboring gene N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase Neighboring gene SEC14 like lipid binding 5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005054383 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
chitobiosyldiphosphodolichol beta-mannosyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054383.1 Reference GeoFor_1.0

    Range
    1326926..1336283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031060475.1 → XP_030916335.1  chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8N5EXY6
    Related
    ENSGFOP00000015469.1, ENSGFOT00000015982.1
    Conserved Domains (1) summary
    cl10013
    Location:1 → 296
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  2. XM_031060474.1 → XP_030916334.1  chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8N5EQN9
    Conserved Domains (1) summary
    cl10013
    Location:1 → 324
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.